Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 TNRC18P3-201ENST00000441896 2691 ntBASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 AC007967.2-201ENST00000432613 625 ntBASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 AL031432.2-201ENST00000566714 459 ntBASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 AL928711.1-201ENST00000570165 459 ntBASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 BX640515.1-201ENST00000617215 977 ntBASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 AC010507.1-201ENST00000633895 436 ntBASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC116Q8IYX3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 RHOQP3-201ENST00000437982 621 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 KRT18P2-201ENST00000447938 1258 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AC018845.2-201ENST00000568326 409 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AC064836.3-201ENST00000607928 673 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AC120114.3-201ENST00000611923 658 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AC007064.4-201ENST00000637740 555 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 AL645728.2-201ENST00000641974 660 ntBASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms