Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.07■□□□□ 0.32
CDKL3Q8IVW4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 AC098831.1-202ENST00000438821 336 ntBASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 CXCL1P1-201ENST00000502804 216 ntBASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 MIR4515-201ENST00000584082 81 ntBASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 AL049840.3-201ENST00000602669 611 ntBASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDKL3Q8IVW4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 AC093909.1-201ENST00000504731 1122 ntBASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 AL160237.2-201ENST00000556165 472 ntBASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 AC104692.2-201ENST00000603054 253 ntBASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 AC006449.6-201ENST00000612330 2296 ntBASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms