Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AC079776.1-201ENST00000401540 1152 ntBASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 SERBP1P3-201ENST00000459980 809 ntBASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 SRD5A3P1-201ENST00000603021 949 ntBASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AC068880.1-201ENST00000507289 2297 ntBASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 GPAA1P2-202ENST00000606848 1787 ntBASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM71Q2Q1W2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 SLC7A15P-201ENST00000424028 1363 ntBASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 HILS1-202ENST00000545329 423 ntBASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 AC132938.2-201ENST00000579188 680 ntBASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 AC004461.2-201ENST00000629517 803 ntBASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 AL591163.1-201ENST00000641757 987 ntBASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM71Q2Q1W2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 AL031731.1-201ENST00000642131 2094 ntBASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 AL512384.1-201ENST00000406683 331 ntBASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 AP006294.1-201ENST00000415407 339 ntBASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 GPR53P-205ENST00000457298 1084 ntBASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 IGHV3-71-201ENST00000523324 359 ntBASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM71Q2Q1W2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms