Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN7AQ01118 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN7AQ01118 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SCN7AQ01118 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SCN7AQ01118 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AC104989.1-201ENST00000519711 778 ntBASIC20.29■□□□□ 0.84
SCN7AQ01118 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.29■□□□□ 0.84
SCN7AQ01118 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN7AQ01118 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.29■□□□□ 0.84
SCN7AQ01118 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AC133552.6-201ENST00000613406 534 ntBASIC20.29■□□□□ 0.84
SCN7AQ01118 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN7AQ01118 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
SCN7AQ01118 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SCN7AQ01118 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SCN7AQ01118 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SCN7AQ01118 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN7AQ01118 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 BOLA2P3-201ENST00000404566 256 ntBASIC20.28■□□□□ 0.84
SCN7AQ01118 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
SCN7AQ01118 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.28■□□□□ 0.84
SCN7AQ01118 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN7AQ01118 AC092552.1-201ENST00000547243 906 ntBASIC20.28■□□□□ 0.84
SCN7AQ01118 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.28■□□□□ 0.84
SCN7AQ01118 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN7AQ01118 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN7AQ01118 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN7AQ01118 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCN7AQ01118 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN7AQ01118 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN7AQ01118 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
SCN7AQ01118 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN7AQ01118 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN7AQ01118 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN7AQ01118 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN7AQ01118 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN7AQ01118 FO393414.2-201ENST00000405153 598 ntBASIC20.27■□□□□ 0.84
SCN7AQ01118 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN7AQ01118 RPL13P2-201ENST00000440687 659 ntBASIC20.27■□□□□ 0.84
SCN7AQ01118 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN7AQ01118 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.27■□□□□ 0.84
SCN7AQ01118 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.27■□□□□ 0.84
SCN7AQ01118 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SCN7AQ01118 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
SCN7AQ01118 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.27■□□□□ 0.84
SCN7AQ01118 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.27■□□□□ 0.84
SCN7AQ01118 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.27■□□□□ 0.84
SCN7AQ01118 AC233724.13-201ENST00000598383 410 ntBASIC20.27■□□□□ 0.84
SCN7AQ01118 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.27■□□□□ 0.84
SCN7AQ01118 PDIA3P1-201ENST00000471856 1510 ntBASIC20.27■□□□□ 0.84
SCN7AQ01118 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
SCN7AQ01118 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.27■□□□□ 0.84
SCN7AQ01118 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
SCN7AQ01118 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCN7AQ01118 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN7AQ01118 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.27■□□□□ 0.83
SCN7AQ01118 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN7AQ01118 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCN7AQ01118 INTS4P2-202ENST00000614726 2019 ntBASIC20.26■□□□□ 0.83
SCN7AQ01118 REXO1L6P-201ENST00000603433 1515 ntBASIC20.26■□□□□ 0.83
SCN7AQ01118 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN7AQ01118 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN7AQ01118 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN7AQ01118 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SCN7AQ01118 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN7AQ01118 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCN7AQ01118 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCN7AQ01118 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCN7AQ01118 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.26■□□□□ 0.83
SCN7AQ01118 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN7AQ01118 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN7AQ01118 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN7AQ01118 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.26■□□□□ 0.83
SCN7AQ01118 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN7AQ01118 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms