Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.15□□□□□ -0.46
APOC4P55056 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
APOC4P55056 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC4P55056 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
APOC4P55056 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC4P55056 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
APOC4P55056 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC4P55056 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC4P55056 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC4P55056 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC4P55056 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC4P55056 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.14□□□□□ -0.47
APOC4P55056 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.14□□□□□ -0.47
APOC4P55056 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 AP000842.3-202ENST00000569238 1080 ntBASIC12.14□□□□□ -0.47
APOC4P55056 AL355385.1-201ENST00000606123 409 ntBASIC12.14□□□□□ -0.47
APOC4P55056 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.14□□□□□ -0.47
APOC4P55056 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
APOC4P55056 FZD10-202ENST00000539839 3282 ntBASIC12.14□□□□□ -0.47
APOC4P55056 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 PCDHB17P-201ENST00000539533 2393 ntBASIC12.14□□□□□ -0.47
APOC4P55056 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
APOC4P55056 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC4P55056 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC4P55056 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC4P55056 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC4P55056 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
APOC4P55056 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 AL139400.1-201ENST00000366220 510 ntBASIC12.13□□□□□ -0.47
APOC4P55056 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC4P55056 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.13□□□□□ -0.47
APOC4P55056 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.13□□□□□ -0.47
APOC4P55056 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms