Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC1A1P43005 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC1A1P43005 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.38■□□□□ 0.37
SLC1A1P43005 OR7E47P-204ENST00000575924 449 ntBASIC17.38■□□□□ 0.37
SLC1A1P43005 MIR4515-201ENST00000584082 81 ntBASIC17.38■□□□□ 0.37
SLC1A1P43005 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
SLC1A1P43005 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A1P43005 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC1A1P43005 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC1A1P43005 AC011270.2-201ENST00000624293 2550 ntBASIC17.37■□□□□ 0.37
SLC1A1P43005 AP002414.3-201ENST00000589352 1468 ntBASIC17.37■□□□□ 0.37
SLC1A1P43005 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A1P43005 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC1A1P43005 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC1A1P43005 AC108073.2-201ENST00000464002 357 ntBASIC17.37■□□□□ 0.37
SLC1A1P43005 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 AC012640.2-201ENST00000561606 901 ntBASIC17.37■□□□□ 0.37
SLC1A1P43005 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC1A1P43005 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC1A1P43005 AC004790.2-201ENST00000623588 572 ntBASIC17.37■□□□□ 0.37
SLC1A1P43005 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC1A1P43005 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC1A1P43005 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A1P43005 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 AC008894.3-201ENST00000624324 3103 ntBASIC17.37■□□□□ 0.37
SLC1A1P43005 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC1A1P43005 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC1A1P43005 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A1P43005 AC008741.2-201ENST00000612792 3115 ntBASIC17.36■□□□□ 0.37
SLC1A1P43005 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 AC024909.3-201ENST00000611513 2257 ntBASIC17.36■□□□□ 0.37
SLC1A1P43005 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC1A1P43005 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC1A1P43005 PRSS29P-201ENST00000440800 595 ntBASIC17.36■□□□□ 0.37
SLC1A1P43005 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC1A1P43005 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC1A1P43005 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC1A1P43005 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC1A1P43005 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A1P43005 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A1P43005 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC1A1P43005 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms