Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFC3P40938 Z92544.3-201ENST00000624747 417 ntBASIC15.22■□□□□ 0.03
RFC3P40938 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.22■□□□□ 0.03
RFC3P40938 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.22■□□□□ 0.03
RFC3P40938 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFC3P40938 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFC3P40938 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFC3P40938 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFC3P40938 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RFC3P40938 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RFC3P40938 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 AC108860.2-201ENST00000562760 2183 ntBASIC15.21■□□□□ 0.03
RFC3P40938 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RFC3P40938 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 WASH6P-202ENST00000359512 1437 ntBASIC15.21■□□□□ 0.03
RFC3P40938 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.21■□□□□ 0.03
RFC3P40938 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.21■□□□□ 0.03
RFC3P40938 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 RBPMS2P1-201ENST00000437762 623 ntBASIC15.21■□□□□ 0.03
RFC3P40938 FAM86GP-201ENST00000448322 971 ntBASIC15.21■□□□□ 0.03
RFC3P40938 AC109635.5-201ENST00000533593 962 ntBASIC15.21■□□□□ 0.03
RFC3P40938 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
RFC3P40938 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.21■□□□□ 0.03
RFC3P40938 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.21■□□□□ 0.03
RFC3P40938 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.21■□□□□ 0.03
RFC3P40938 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.21■□□□□ 0.03
RFC3P40938 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.21■□□□□ 0.03
RFC3P40938 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.21■□□□□ 0.03
RFC3P40938 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.21■□□□□ 0.03
RFC3P40938 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.21■□□□□ 0.03
RFC3P40938 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC3P40938 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC3P40938 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.21■□□□□ 0.02
RFC3P40938 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC3P40938 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC3P40938 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RFC3P40938 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC3P40938 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
RFC3P40938 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC3P40938 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.21■□□□□ 0.02
RFC3P40938 AL023806.1-201ENST00000603994 1649 ntBASIC15.21■□□□□ 0.02
RFC3P40938 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC3P40938 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.21■□□□□ 0.02
RFC3P40938 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RFC3P40938 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 AL645608.8-201ENST00000606034 2086 ntBASIC15.2■□□□□ 0.02
RFC3P40938 AL671710.1-201ENST00000610245 2349 ntBASIC15.2■□□□□ 0.02
RFC3P40938 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.2■□□□□ 0.02
RFC3P40938 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.2■□□□□ 0.02
RFC3P40938 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.2■□□□□ 0.02
RFC3P40938 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RFC3P40938 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.2■□□□□ 0.02
RFC3P40938 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RFC3P40938 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC3P40938 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC3P40938 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC3P40938 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC3P40938 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFC3P40938 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC3P40938 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFC3P40938 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms