Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HOXB3P14651 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXB3P14651 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXB3P14651 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXB3P14651 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXB3P14651 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXB3P14651 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXB3P14651 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXB3P14651 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 FO538757.1-201ENST00000623083 1397 ntBASIC16.29■□□□□ 0.2
HOXB3P14651 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 RPS20P25-201ENST00000412447 352 ntBASIC16.29■□□□□ 0.2
HOXB3P14651 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.29■□□□□ 0.2
HOXB3P14651 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXB3P14651 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXB3P14651 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HOXB3P14651 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.29■□□□□ 0.2
HOXB3P14651 FAM8A2P-201ENST00000528813 1142 ntBASIC16.29■□□□□ 0.2
HOXB3P14651 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXB3P14651 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXB3P14651 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 AC005915.1-201ENST00000624912 2018 ntBASIC16.29■□□□□ 0.2
HOXB3P14651 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
HOXB3P14651 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXB3P14651 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXB3P14651 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXB3P14651 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXB3P14651 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXB3P14651 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXB3P14651 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXB3P14651 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXB3P14651 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXB3P14651 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXB3P14651 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXB3P14651 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXB3P14651 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXB3P14651 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXB3P14651 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXB3P14651 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.28■□□□□ 0.2
HOXB3P14651 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXB3P14651 AC005014.3-201ENST00000605985 190 ntBASIC16.28■□□□□ 0.2
HOXB3P14651 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXB3P14651 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXB3P14651 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXB3P14651 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 PCDHA12-202ENST00000613593 2588 ntBASIC16.28■□□□□ 0.2
HOXB3P14651 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXB3P14651 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXB3P14651 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXB3P14651 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXB3P14651 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXB3P14651 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.27■□□□□ 0.2
HOXB3P14651 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXB3P14651 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXB3P14651 PCDHB17P-201ENST00000539533 2393 ntBASIC16.27■□□□□ 0.2
HOXB3P14651 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HOXB3P14651 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXB3P14651 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms