Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTPRFP10586 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPRFP10586 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTPRFP10586 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPRFP10586 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.72■□□□□ 0.59
PTPRFP10586 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTPRFP10586 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPRFP10586 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPRFP10586 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPRFP10586 AL162726.2-201ENST00000438986 1017 ntBASIC18.72■□□□□ 0.59
PTPRFP10586 BNIP3P42-201ENST00000454982 569 ntBASIC18.72■□□□□ 0.59
PTPRFP10586 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPRFP10586 AC092658.1-201ENST00000505836 891 ntBASIC18.72■□□□□ 0.59
PTPRFP10586 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.72■□□□□ 0.59
PTPRFP10586 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.72■□□□□ 0.59
PTPRFP10586 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPRFP10586 BNIP3P29-201ENST00000598302 571 ntBASIC18.72■□□□□ 0.59
PTPRFP10586 AC011447.5-201ENST00000616168 564 ntBASIC18.72■□□□□ 0.59
PTPRFP10586 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPRFP10586 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTPRFP10586 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPRFP10586 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPRFP10586 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPRFP10586 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPRFP10586 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPRFP10586 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTPRFP10586 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 PDIA3P1-201ENST00000471856 1510 ntBASIC18.71■□□□□ 0.59
PTPRFP10586 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
PTPRFP10586 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPRFP10586 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPRFP10586 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PTPRFP10586 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPRFP10586 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPRFP10586 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 MIR5189-201ENST00000577370 114 ntBASIC18.71■□□□□ 0.59
PTPRFP10586 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPRFP10586 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPRFP10586 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPRFP10586 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PTPRFP10586 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPRFP10586 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPRFP10586 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPRFP10586 AC139713.2-201ENST00000641328 2723 ntBASIC18.71■□□□□ 0.59
PTPRFP10586 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 MEP1AP4-201ENST00000423244 1087 ntBASIC18.7■□□□□ 0.58
PTPRFP10586 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPRFP10586 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPRFP10586 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPRFP10586 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPRFP10586 AC104989.1-201ENST00000519711 778 ntBASIC18.7■□□□□ 0.58
PTPRFP10586 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPRFP10586 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPRFP10586 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PTPRFP10586 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPRFP10586 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTPRFP10586 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPRFP10586 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PTPRFP10586 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PTPRFP10586 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 CROCCP4-201ENST00000457096 498 ntBASIC18.7■□□□□ 0.58
PTPRFP10586 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.7■□□□□ 0.58
PTPRFP10586 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPRFP10586 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPRFP10586 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPRFP10586 AL645608.8-201ENST00000606034 2086 ntBASIC18.7■□□□□ 0.58
PTPRFP10586 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPRFP10586 AC026471.1-201ENST00000564629 3026 ntBASIC18.7■□□□□ 0.58
PTPRFP10586 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPRFP10586 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPRFP10586 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.69■□□□□ 0.58
PTPRFP10586 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PTPRFP10586 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPRFP10586 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTPRFP10586 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPRFP10586 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPRFP10586 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTPRFP10586 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPRFP10586 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PTPRFP10586 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.69■□□□□ 0.58
PTPRFP10586 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTPRFP10586 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms