Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 AL603832.2-201ENST00000566195 2125 ntBASIC15.1■□□□□ 0.01
HMGN1P05114 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGN1P05114 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGN1P05114 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGN1P05114 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.09■□□□□ 0.01
HMGN1P05114 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGN1P05114 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGN1P05114 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HMGN1P05114 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGN1P05114 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HMGN1P05114 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGN1P05114 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGN1P05114 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.09■□□□□ 0.01
HMGN1P05114 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HMGN1P05114 MIR4492-201ENST00000581627 80 ntBASIC15.09■□□□□ 0.01
HMGN1P05114 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGN1P05114 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
HMGN1P05114 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HMGN1P05114 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGN1P05114 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGN1P05114 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HMGN1P05114 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 LINC01144-201ENST00000626198 1710 ntBASIC15.09■□□□□ 0.01
HMGN1P05114 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGN1P05114 AL031731.1-201ENST00000642131 2094 ntBASIC15.08■□□□□ 0.01
HMGN1P05114 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGN1P05114 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.08■□□□□ 0.01
HMGN1P05114 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGN1P05114 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGN1P05114 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGN1P05114 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HMGN1P05114 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
HMGN1P05114 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.08■□□□□ 0.01
HMGN1P05114 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.08■□□□□ 0
HMGN1P05114 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.08■□□□□ 0
HMGN1P05114 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.08■□□□□ 0
HMGN1P05114 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.08■□□□□ 0
HMGN1P05114 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.08■□□□□ 0
HMGN1P05114 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.08■□□□□ 0
HMGN1P05114 AP000867.3-201ENST00000524675 377 ntBASIC15.08■□□□□ 0
HMGN1P05114 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.08■□□□□ 0
HMGN1P05114 AC012615.1-201ENST00000565797 1299 ntBASIC15.08■□□□□ 0
HMGN1P05114 AL591684.3-201ENST00000605187 298 ntBASIC15.08■□□□□ 0
HMGN1P05114 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HMGN1P05114 AL022326.1-202ENST00000641533 845 ntBASIC15.08■□□□□ 0
HMGN1P05114 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.08■□□□□ 0
HMGN1P05114 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.08■□□□□ 0
HMGN1P05114 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.08■□□□□ 0
HMGN1P05114 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.08■□□□□ 0
HMGN1P05114 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms