Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 HBZP1-201ENST00000354915 429 ntBASIC13.6□□□□□ -0.23
SSSCA1O60232 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SSSCA1O60232 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SSSCA1O60232 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.6□□□□□ -0.23
SSSCA1O60232 AC005336.2-201ENST00000593183 939 ntBASIC13.6□□□□□ -0.23
SSSCA1O60232 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 AP005117.1-202ENST00000581724 1908 ntBASIC13.6□□□□□ -0.23
SSSCA1O60232 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 KRT8P49-201ENST00000604166 1432 ntBASIC13.59□□□□□ -0.23
SSSCA1O60232 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SSSCA1O60232 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.59□□□□□ -0.23
SSSCA1O60232 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.59□□□□□ -0.23
SSSCA1O60232 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.59□□□□□ -0.23
SSSCA1O60232 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.59□□□□□ -0.23
SSSCA1O60232 AC011558.1-201ENST00000623459 338 ntBASIC13.59□□□□□ -0.23
SSSCA1O60232 AC073592.5-201ENST00000624854 528 ntBASIC13.59□□□□□ -0.23
SSSCA1O60232 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 AC006277.1-201ENST00000624348 1610 ntBASIC13.59□□□□□ -0.23
SSSCA1O60232 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.59□□□□□ -0.23
SSSCA1O60232 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.59□□□□□ -0.23
SSSCA1O60232 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSSCA1O60232 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SSSCA1O60232 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SSSCA1O60232 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.58□□□□□ -0.23
SSSCA1O60232 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.23
SSSCA1O60232 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SSSCA1O60232 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.58□□□□□ -0.23
SSSCA1O60232 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms