Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.79■■□□□ 1.08
APAF1O14727 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.78■■□□□ 1.08
APAF1O14727 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.78■■□□□ 1.08
APAF1O14727 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 MIR4469-201ENST00000583919 79 ntBASIC21.78■■□□□ 1.08
APAF1O14727 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
APAF1O14727 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.78■■□□□ 1.08
APAF1O14727 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
APAF1O14727 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 AC073439.1-201ENST00000624121 1774 ntBASIC21.77■■□□□ 1.08
APAF1O14727 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
APAF1O14727 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
APAF1O14727 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.77■■□□□ 1.08
APAF1O14727 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.77■■□□□ 1.08
APAF1O14727 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.77■■□□□ 1.08
APAF1O14727 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.77■■□□□ 1.08
APAF1O14727 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.77■■□□□ 1.08
APAF1O14727 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
APAF1O14727 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
APAF1O14727 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.77■■□□□ 1.08
APAF1O14727 AC055717.3-201ENST00000622967 595 ntBASIC21.77■■□□□ 1.08
APAF1O14727 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.77■■□□□ 1.08
APAF1O14727 AC005622.1-201ENST00000636801 1703 ntBASIC21.77■■□□□ 1.08
APAF1O14727 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
APAF1O14727 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
APAF1O14727 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
APAF1O14727 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
APAF1O14727 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.76■■□□□ 1.07
APAF1O14727 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 CEND1P1-201ENST00000451006 455 ntBASIC21.76■■□□□ 1.07
APAF1O14727 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.76■■□□□ 1.07
APAF1O14727 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.76■■□□□ 1.07
APAF1O14727 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
APAF1O14727 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.76■■□□□ 1.07
APAF1O14727 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
APAF1O14727 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
APAF1O14727 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
APAF1O14727 AKAP8P1-201ENST00000434743 1349 ntBASIC21.76■■□□□ 1.07
APAF1O14727 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APAF1O14727 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC21.76■■□□□ 1.07
APAF1O14727 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.75■■□□□ 1.07
APAF1O14727 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.75■■□□□ 1.07
APAF1O14727 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.75■■□□□ 1.07
APAF1O14727 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
APAF1O14727 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms