Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 MYCLP1-201ENST00000372451 1075 ntBASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 MIPEPP3-201ENST00000412105 444 ntBASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 NIFKP9-201ENST00000419265 221 ntBASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 AL050303.2-201ENST00000619798 666 ntBASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 AC112497.1-201ENST00000624824 639 ntBASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAPPC1Q9Y5R8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 KRT16P5-201ENST00000455284 522 ntBASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 AC232323.1-201ENST00000540724 2099 ntBASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 REXO1L5P-201ENST00000622260 2098 ntBASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAPPC1Q9Y5R8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms