Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 AC105020.1-201ENST00000435356 2205 ntBASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PCDHGA9Q9Y5G4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 AC005034.1-201ENST00000426657 489 ntBASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 MIR3909-201ENST00000579518 119 ntBASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA9Q9Y5G4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 AC008677.1-201ENST00000519230 1561 ntBASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 FO538757.1-201ENST00000623083 1397 ntBASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 AL035252.4-201ENST00000624174 288 ntBASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 AC008267.7-201ENST00000624570 1194 ntBASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms