Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC092384.3-202ENST00000564646 2873 ntBASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 LINC02228-204ENST00000642115 2962 ntBASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 KLF4P1-201ENST00000412782 1185 ntBASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 SPDYE15P-201ENST00000424157 909 ntBASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 AC092597.1-201ENST00000487352 616 ntBASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 Z83836.1-201ENST00000624605 1642 ntBASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
KCNIP3Q9Y2W7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 ATP5G1P1-201ENST00000448724 379 ntBASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 AL441883.1-201ENST00000566170 1045 ntBASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 AP006294.2-201ENST00000641667 209 ntBASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 AC126177.1-201ENST00000547829 2218 ntBASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP3Q9Y2W7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms