Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 AC091812.2-201ENST00000619081 385 ntBASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGC3Q9UN70 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 PMS2P7-201ENST00000506558 1336 ntBASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AC093724.1-201ENST00000448659 1027 ntBASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 REXO1L8P-201ENST00000604378 1897 ntBASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 TNRC18P3-201ENST00000441896 2691 ntBASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGC3Q9UN70 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 AC006449.6-201ENST00000612330 2296 ntBASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 AL592424.1-201ENST00000563624 1536 ntBASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGC3Q9UN70 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDHGC3Q9UN70 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGC3Q9UN70 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms