Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AP005139.1-201ENST00000580702 1647 ntBASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 AC005539.1-201ENST00000443768 1479 ntBASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC10.53□□□□□ -0.72
KRTAP3-3Q9BYR6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 IL1RAP-210ENST00000434491 1565 ntTSL 5 BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
KRTAP3-3Q9BYR6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 BX005019.1-201ENST00000561881 1810 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RNU4-73P-201ENST00000363164 141 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 SOD2-203ENST00000367055 990 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 CD1E-201ENST00000368154 435 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RPL31P1-201ENST00000398116 372 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RPL23AP59-201ENST00000399415 461 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RPSAP45-201ENST00000401872 874 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 EIF4E2-204ENST00000409322 797 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 USP9YP36-201ENST00000424581 829 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 MAPRE1P3-201ENST00000435438 796 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 SOD2-205ENST00000444946 917 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 CEACAMP5-201ENST00000448037 961 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AL441964.1-201ENST00000454528 658 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 CAPNS2-201ENST00000457326 1016 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 OR7E129P-201ENST00000504655 968 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 PNN-202ENST00000553331 656 ntTSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC136944.3-201ENST00000568520 554 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 TMPOP2-201ENST00000575258 1201 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC069366.1-201ENST00000583159 838 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 PART1_2.1-201ENST00000612397 250 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC048341.3-201ENST00000619323 491 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC010947.1-201ENST00000623454 693 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AC073869.7-201ENST00000640874 297 ntBASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms