Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPENQ96T58 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SPENQ96T58 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.73□□□□□ -0.05
SPENQ96T58 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.73□□□□□ -0.05
SPENQ96T58 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.73□□□□□ -0.05
SPENQ96T58 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SPENQ96T58 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.73□□□□□ -0.05
SPENQ96T58 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.73□□□□□ -0.05
SPENQ96T58 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 WFDC1-204ENST00000613603 549 ntBASIC14.73□□□□□ -0.05
SPENQ96T58 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SPENQ96T58 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 MIR5189-201ENST00000577370 114 ntBASIC14.73□□□□□ -0.05
SPENQ96T58 AC243960.2-201ENST00000600996 747 ntBASIC14.73□□□□□ -0.05
SPENQ96T58 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SPENQ96T58 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.73□□□□□ -0.05
SPENQ96T58 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 AL033527.5-201ENST00000641382 801 ntBASIC14.73□□□□□ -0.05
SPENQ96T58 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.73□□□□□ -0.05
SPENQ96T58 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPENQ96T58 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SPENQ96T58 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.72□□□□□ -0.05
SPENQ96T58 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.72□□□□□ -0.05
SPENQ96T58 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.72□□□□□ -0.05
SPENQ96T58 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.72□□□□□ -0.05
SPENQ96T58 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.72□□□□□ -0.05
SPENQ96T58 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SPENQ96T58 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.72□□□□□ -0.05
SPENQ96T58 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.72□□□□□ -0.05
SPENQ96T58 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.72□□□□□ -0.05
SPENQ96T58 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.72□□□□□ -0.05
SPENQ96T58 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.72□□□□□ -0.05
SPENQ96T58 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SPENQ96T58 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.72□□□□□ -0.05
SPENQ96T58 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.72□□□□□ -0.05
SPENQ96T58 BX323043.1-201ENST00000641006 1765 ntBASIC14.72□□□□□ -0.05
SPENQ96T58 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.72□□□□□ -0.05
SPENQ96T58 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
SPENQ96T58 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SPENQ96T58 AC114501.2-201ENST00000439631 535 ntBASIC14.72□□□□□ -0.05
SPENQ96T58 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.72□□□□□ -0.05
SPENQ96T58 AC011495.1-201ENST00000498085 584 ntBASIC14.72□□□□□ -0.05
SPENQ96T58 AL158212.4-201ENST00000624062 1286 ntBASIC14.72□□□□□ -0.05
SPENQ96T58 AP001094.4-201ENST00000579008 2176 ntBASIC14.72□□□□□ -0.05
SPENQ96T58 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPENQ96T58 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.71□□□□□ -0.05
SPENQ96T58 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SPENQ96T58 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.71□□□□□ -0.05
SPENQ96T58 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.71□□□□□ -0.05
SPENQ96T58 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.71□□□□□ -0.05
SPENQ96T58 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.71□□□□□ -0.05
SPENQ96T58 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SPENQ96T58 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
SPENQ96T58 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.71□□□□□ -0.05
SPENQ96T58 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SPENQ96T58 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.71□□□□□ -0.05
SPENQ96T58 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SPENQ96T58 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SPENQ96T58 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.71□□□□□ -0.05
SPENQ96T58 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.71□□□□□ -0.05
SPENQ96T58 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SPENQ96T58 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.71□□□□□ -0.05
SPENQ96T58 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.71□□□□□ -0.05
SPENQ96T58 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPENQ96T58 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.71□□□□□ -0.05
SPENQ96T58 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms