Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AL021920.2-201ENST00000624828 1351 ntBASIC19.3■□□□□ 0.68
PGBD1Q96JS3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PGBD1Q96JS3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 AC006277.1-201ENST00000624348 1610 ntBASIC19.29■□□□□ 0.68
PGBD1Q96JS3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 PDPK2P-202ENST00000562415 1191 ntBASIC19.29■□□□□ 0.68
PGBD1Q96JS3 AL078644.1-201ENST00000609881 752 ntBASIC19.29■□□□□ 0.68
PGBD1Q96JS3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.29■□□□□ 0.68
PGBD1Q96JS3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 AC022188.1-201ENST00000620960 1664 ntBASIC19.28■□□□□ 0.68
PGBD1Q96JS3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 KRT18P13-201ENST00000400056 1290 ntBASIC19.28■□□□□ 0.68
PGBD1Q96JS3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 AC004832.2-201ENST00000426397 482 ntBASIC19.28■□□□□ 0.68
PGBD1Q96JS3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 AC013467.2-201ENST00000605472 835 ntBASIC19.28■□□□□ 0.68
PGBD1Q96JS3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 AC007064.4-201ENST00000637740 555 ntBASIC19.28■□□□□ 0.68
PGBD1Q96JS3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.28■□□□□ 0.68
PGBD1Q96JS3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.27■□□□□ 0.68
PGBD1Q96JS3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD1Q96JS3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PGBD1Q96JS3 MTHFR-217ENST00000641820 1569 ntBASIC19.27■□□□□ 0.67
PGBD1Q96JS3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PGBD1Q96JS3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PGBD1Q96JS3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PGBD1Q96JS3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.27■□□□□ 0.67
PGBD1Q96JS3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PGBD1Q96JS3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms