Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 POM121L3P-201ENST00000419331 1163 ntBASIC15.85■□□□□ 0.13
LRRC58Q96CX6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 POU5F1P6-201ENST00000466990 990 ntBASIC15.85■□□□□ 0.13
LRRC58Q96CX6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 MPDU1-223ENST00000582151 728 ntBASIC15.85■□□□□ 0.13
LRRC58Q96CX6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 NFIC-211ENST00000641145 8399 ntBASIC15.85■□□□□ 0.13
LRRC58Q96CX6 CDC14C-201ENST00000428251 1719 ntBASIC15.85■□□□□ 0.13
LRRC58Q96CX6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC58Q96CX6 AC112504.1-201ENST00000623415 1841 ntBASIC15.84■□□□□ 0.13
LRRC58Q96CX6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 PCGF3-213ENST00000620529 1899 ntBASIC15.84■□□□□ 0.13
LRRC58Q96CX6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 TSSC2-201ENST00000450217 709 ntBASIC15.84■□□□□ 0.13
LRRC58Q96CX6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 TOB2P1-201ENST00000469761 992 ntBASIC15.84■□□□□ 0.13
LRRC58Q96CX6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 LINC01144-201ENST00000626198 1710 ntBASIC15.84■□□□□ 0.13
LRRC58Q96CX6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC58Q96CX6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC58Q96CX6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC58Q96CX6 LINC02447-202ENST00000501888 2146 ntBASIC15.83■□□□□ 0.13
LRRC58Q96CX6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
LRRC58Q96CX6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.83■□□□□ 0.13
LRRC58Q96CX6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.83■□□□□ 0.13
LRRC58Q96CX6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LRRC58Q96CX6 AC022532.1-201ENST00000624563 1728 ntBASIC15.83■□□□□ 0.13
LRRC58Q96CX6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 AC068418.2-201ENST00000577309 3703 ntBASIC15.83■□□□□ 0.12
LRRC58Q96CX6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC58Q96CX6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms