Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.69□□□□□ -0.06
AP3S1Q92572 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.69□□□□□ -0.06
AP3S1Q92572 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.69□□□□□ -0.06
AP3S1Q92572 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.69□□□□□ -0.06
AP3S1Q92572 AC026471.5-201ENST00000615068 467 ntBASIC14.69□□□□□ -0.06
AP3S1Q92572 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 AL353692.3-201ENST00000407031 1396 ntBASIC14.69□□□□□ -0.06
AP3S1Q92572 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 AC006277.1-201ENST00000624348 1610 ntBASIC14.68□□□□□ -0.06
AP3S1Q92572 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 TSPY14P-201ENST00000303979 915 ntBASIC14.68□□□□□ -0.06
AP3S1Q92572 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 IGHGP-201ENST00000390555 1178 ntBASIC14.68□□□□□ -0.06
AP3S1Q92572 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.68□□□□□ -0.06
AP3S1Q92572 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
AP3S1Q92572 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 FITM1-202ENST00000559294 800 ntBASIC14.68□□□□□ -0.06
AP3S1Q92572 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 AC092666.2-201ENST00000613287 246 ntBASIC14.68□□□□□ -0.06
AP3S1Q92572 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 AC073912.3-201ENST00000624414 853 ntBASIC14.68□□□□□ -0.06
AP3S1Q92572 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S1Q92572 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S1Q92572 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
AP3S1Q92572 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 KRT8P10-201ENST00000450021 1447 ntBASIC14.67□□□□□ -0.06
AP3S1Q92572 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP3S1Q92572 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S1Q92572 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.67□□□□□ -0.06
AP3S1Q92572 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP3S1Q92572 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
AP3S1Q92572 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S1Q92572 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms