Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 AC016027.1-202ENST00000607927 1699 ntBASIC17.57■□□□□ 0.4
UBA3Q8TBC4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
UBA3Q8TBC4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 PCDH8P1-201ENST00000428983 2773 ntBASIC17.56■□□□□ 0.4
UBA3Q8TBC4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 GPX1P2-201ENST00000429271 606 ntBASIC17.56■□□□□ 0.4
UBA3Q8TBC4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 DNAJB3-201ENST00000446806 729 ntBASIC17.56■□□□□ 0.4
UBA3Q8TBC4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 AC005829.1-201ENST00000570002 483 ntBASIC17.56■□□□□ 0.4
UBA3Q8TBC4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.56■□□□□ 0.4
UBA3Q8TBC4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA3Q8TBC4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 AC092364.2-201ENST00000596710 2692 ntBASIC17.55■□□□□ 0.4
UBA3Q8TBC4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 UPF3AP3-201ENST00000420996 769 ntBASIC17.55■□□□□ 0.4
UBA3Q8TBC4 AL671277.1-201ENST00000429656 993 ntBASIC17.55■□□□□ 0.4
UBA3Q8TBC4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.55■□□□□ 0.4
UBA3Q8TBC4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 MIR3687-2-201ENST00000577708 61 ntBASIC17.55■□□□□ 0.4
UBA3Q8TBC4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 MIR3687-1-201ENST00000614492 61 ntBASIC17.55■□□□□ 0.4
UBA3Q8TBC4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA3Q8TBC4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms