Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCC2Q8TAQ2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCC2Q8TAQ2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCC2Q8TAQ2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 AC079328.2-201ENST00000561241 3354 ntBASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 MCCD1P2-201ENST00000423228 335 ntBASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 GPX1P2-201ENST00000429271 606 ntBASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 PDPK2P-202ENST00000562415 1191 ntBASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 GPAA1P2-202ENST00000606848 1787 ntBASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SMARCC2Q8TAQ2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 RPSAP43-201ENST00000402237 625 ntBASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 AC112482.1-201ENST00000492080 688 ntBASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SMARCC2Q8TAQ2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 AC074386.1-202ENST00000463561 864 ntBASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCC2Q8TAQ2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms