Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 LINC01144-201ENST00000626198 1710 ntBASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 MTHFR-217ENST00000641820 1569 ntBASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH19Q8TAB3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDH19Q8TAB3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDH19Q8TAB3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PCDH19Q8TAB3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 AC007967.2-201ENST00000432613 625 ntBASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 AC018845.2-201ENST00000568326 409 ntBASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 AC064836.3-201ENST00000607928 673 ntBASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.14■□□□□ 0.33
PCDH19Q8TAB3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 MIR3909-201ENST00000579518 119 ntBASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PCDH19Q8TAB3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms