Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 AKAP8P1-201ENST00000434743 1349 ntBASIC17.01■□□□□ 0.31
RTL3Q8N8U3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 AC112482.1-201ENST00000492080 688 ntBASIC17.01■□□□□ 0.31
RTL3Q8N8U3 YBX1P5-201ENST00000509441 847 ntBASIC17.01■□□□□ 0.31
RTL3Q8N8U3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 AC084018.2-201ENST00000613093 2607 ntBASIC17.01■□□□□ 0.31
RTL3Q8N8U3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 LINC01144-201ENST00000626198 1710 ntBASIC17.01■□□□□ 0.31
RTL3Q8N8U3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL3Q8N8U3 PKD1P5-201ENST00000532415 10291 ntBASIC17.01■□□□□ 0.31
RTL3Q8N8U3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RTL3Q8N8U3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTL3Q8N8U3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTL3Q8N8U3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17■□□□□ 0.31
RTL3Q8N8U3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 FAM86C2P-203ENST00000528684 1004 ntBASIC17■□□□□ 0.31
RTL3Q8N8U3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17■□□□□ 0.31
RTL3Q8N8U3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17■□□□□ 0.31
RTL3Q8N8U3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17■□□□□ 0.31
RTL3Q8N8U3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17■□□□□ 0.31
RTL3Q8N8U3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 AC023511.2-201ENST00000618803 211 ntBASIC17■□□□□ 0.31
RTL3Q8N8U3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17■□□□□ 0.31
RTL3Q8N8U3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 ME2P1-201ENST00000426028 1970 ntBASIC17■□□□□ 0.31
RTL3Q8N8U3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
RTL3Q8N8U3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL3Q8N8U3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTL3Q8N8U3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 KRT18P13-201ENST00000400056 1290 ntBASIC16.99■□□□□ 0.31
RTL3Q8N8U3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 TFAMP1-201ENST00000412727 736 ntBASIC16.99■□□□□ 0.31
RTL3Q8N8U3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 AL135744.1-201ENST00000565098 629 ntBASIC16.99■□□□□ 0.31
RTL3Q8N8U3 MIR4469-201ENST00000583919 79 ntBASIC16.99■□□□□ 0.31
RTL3Q8N8U3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL3Q8N8U3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms