Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 PCDHB17P-201ENST00000539533 2393 ntBASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 ADH5P3-201ENST00000433842 1137 ntBASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH20Q8N6Y1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 AC008741.2-201ENST00000612792 3115 ntBASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 AC092474.2-201ENST00000424288 719 ntBASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 AL671277.1-201ENST00000429656 993 ntBASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 AP000344.2-201ENST00000512987 629 ntBASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDH20Q8N6Y1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms