Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 TSSK5P-201ENST00000423978 907 ntBASIC17.61■□□□□ 0.41
RNF135Q8IUD6 RPS2P32-201ENST00000439199 892 ntBASIC17.61■□□□□ 0.41
RNF135Q8IUD6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 AC017083.2-201ENST00000608069 979 ntBASIC17.61■□□□□ 0.41
RNF135Q8IUD6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 AC073592.8-201ENST00000624126 511 ntBASIC17.61■□□□□ 0.41
RNF135Q8IUD6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RNF135Q8IUD6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 TP53TG3HP-202ENST00000569755 579 ntBASIC17.6■□□□□ 0.41
RNF135Q8IUD6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF135Q8IUD6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms