Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 HCG4-201ENST00000418983 998 ntBASIC16.6■□□□□ 0.25
LDB1Q86U70 AC007967.2-201ENST00000432613 625 ntBASIC16.6■□□□□ 0.25
LDB1Q86U70 RPL13AP23-201ENST00000480739 586 ntBASIC16.6■□□□□ 0.25
LDB1Q86U70 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 SLC25A1P1-201ENST00000528351 927 ntBASIC16.6■□□□□ 0.25
LDB1Q86U70 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
LDB1Q86U70 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.6■□□□□ 0.25
LDB1Q86U70 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.6■□□□□ 0.25
LDB1Q86U70 AC034105.1-201ENST00000563488 319 ntBASIC16.6■□□□□ 0.25
LDB1Q86U70 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 AC010507.1-201ENST00000633895 436 ntBASIC16.6■□□□□ 0.25
LDB1Q86U70 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 IL9RP2-201ENST00000423948 1312 ntBASIC16.6■□□□□ 0.25
LDB1Q86U70 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.6■□□□□ 0.25
LDB1Q86U70 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LDB1Q86U70 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB1Q86U70 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB1Q86U70 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
LDB1Q86U70 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.59■□□□□ 0.25
LDB1Q86U70 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 HMGA1P7-201ENST00000406908 502 ntBASIC16.59■□□□□ 0.25
LDB1Q86U70 AL590627.1-203ENST00000421194 1026 ntBASIC16.59■□□□□ 0.25
LDB1Q86U70 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.59■□□□□ 0.25
LDB1Q86U70 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 AC018845.2-201ENST00000568326 409 ntBASIC16.59■□□□□ 0.25
LDB1Q86U70 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.59■□□□□ 0.25
LDB1Q86U70 MIR4515-201ENST00000584082 81 ntBASIC16.59■□□□□ 0.25
LDB1Q86U70 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
LDB1Q86U70 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.59■□□□□ 0.25
LDB1Q86U70 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LDB1Q86U70 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LDB1Q86U70 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.59■□□□□ 0.25
LDB1Q86U70 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LDB1Q86U70 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.59■□□□□ 0.25
LDB1Q86U70 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB1Q86U70 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LDB1Q86U70 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LDB1Q86U70 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.58■□□□□ 0.25
LDB1Q86U70 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB1Q86U70 PCDHA1-201ENST00000378133 2726 ntBASIC16.58■□□□□ 0.25
LDB1Q86U70 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.58■□□□□ 0.24
LDB1Q86U70 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB1Q86U70 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LDB1Q86U70 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LDB1Q86U70 AC026396.1-201ENST00000419388 421 ntBASIC16.58■□□□□ 0.24
LDB1Q86U70 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms