Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 AC093724.1-201ENST00000448659 1027 ntBASIC17.22■□□□□ 0.35
TRNP1Q6NT89 POU5F1P6-201ENST00000466990 990 ntBASIC17.22■□□□□ 0.35
TRNP1Q6NT89 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 RARRES2P8-201ENST00000566335 367 ntBASIC17.22■□□□□ 0.35
TRNP1Q6NT89 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.22■□□□□ 0.35
TRNP1Q6NT89 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRNP1Q6NT89 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 FOXO1B-201ENST00000504678 1527 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AC090340.1-201ENST00000620778 4980 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AC026691.1-201ENST00000602502 2017 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 HTR5BP-201ENST00000430851 1154 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 KRT18P34-201ENST00000488218 1270 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 KRT8P48-201ENST00000515599 1220 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AL135744.1-201ENST00000565098 629 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AL161645.1-201ENST00000622716 1255 ntBASIC17.21■□□□□ 0.35
TRNP1Q6NT89 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.21■□□□□ 0.35
TRNP1Q6NT89 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.21■□□□□ 0.34
TRNP1Q6NT89 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRNP1Q6NT89 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
TRNP1Q6NT89 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.21■□□□□ 0.34
TRNP1Q6NT89 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRNP1Q6NT89 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.21■□□□□ 0.34
TRNP1Q6NT89 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRNP1Q6NT89 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 LINC02199-201ENST00000506655 2702 ntBASIC17.2■□□□□ 0.34
TRNP1Q6NT89 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 AL671277.1-201ENST00000429656 993 ntBASIC17.2■□□□□ 0.34
TRNP1Q6NT89 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.2■□□□□ 0.34
TRNP1Q6NT89 AC243562.1-201ENST00000560672 389 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms