Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 ACTG1P17-201ENST00000558391 1119 ntBASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 AC091271.1-201ENST00000611877 1162 ntBASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 MIR6727-201ENST00000620702 65 ntBASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 ZBTB12BP-201ENST00000314232 1122 ntBASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 FAM86LP-201ENST00000478302 853 ntBASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 RHOXF1P1-202ENST00000635473 501 ntBASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNAPC4Q5SXM2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC26.59■■□□□ 1.85
SNAPC4Q5SXM2 AL138688.1-201ENST00000624851 1594 ntBASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 MIR326-201ENST00000362220 95 ntBASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 AC012441.1-201ENST00000446669 685 ntBASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 AC079316.1-201ENST00000548397 411 ntBASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 CLUHP6-201ENST00000580789 941 ntBASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 AL049840.4-201ENST00000602422 811 ntBASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC26.58■■□□□ 1.85
SNAPC4Q5SXM2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC26.58■■□□□ 1.84
SNAPC4Q5SXM2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SNAPC4Q5SXM2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.84
SNAPC4Q5SXM2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 EEF1DP4-201ENST00000446006 880 ntBASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC26.57■■□□□ 1.84
SNAPC4Q5SXM2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms