Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 AL158211.2-201ENST00000607282 395 ntBASIC17.53■□□□□ 0.4
VARS2Q5ST30 AC073592.8-201ENST00000624126 511 ntBASIC17.53■□□□□ 0.4
VARS2Q5ST30 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 AP001094.4-201ENST00000579008 2176 ntBASIC17.53■□□□□ 0.4
VARS2Q5ST30 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.52■□□□□ 0.4
VARS2Q5ST30 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 TSPY16P-201ENST00000449843 468 ntBASIC17.52■□□□□ 0.4
VARS2Q5ST30 AL512638.1-201ENST00000457493 794 ntBASIC17.52■□□□□ 0.4
VARS2Q5ST30 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARS2Q5ST30 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.52■□□□□ 0.4
VARS2Q5ST30 AL031731.1-201ENST00000642131 2094 ntBASIC17.52■□□□□ 0.39
VARS2Q5ST30 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
VARS2Q5ST30 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 AL603756.1-201ENST00000606511 2163 ntBASIC17.52■□□□□ 0.39
VARS2Q5ST30 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VARS2Q5ST30 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.52■□□□□ 0.39
VARS2Q5ST30 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VARS2Q5ST30 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VARS2Q5ST30 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 MIR661-201ENST00000384842 89 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 AC236430.1-201ENST00000402231 743 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 AL353705.2-201ENST00000428243 662 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 AC241585.1-201ENST00000433527 519 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 TERF1P3-201ENST00000505638 1227 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 AC027369.6-201ENST00000525520 931 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 AC020765.3-201ENST00000613051 740 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 SPDYE12P-201ENST00000618416 771 ntBASIC17.51■□□□□ 0.39
VARS2Q5ST30 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VARS2Q5ST30 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VARS2Q5ST30 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms