Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.54■□□□□ 0.72
CACNB3P54284 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CACNB3P54284 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CACNB3P54284 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.54■□□□□ 0.72
CACNB3P54284 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.54■□□□□ 0.72
CACNB3P54284 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.54■□□□□ 0.72
CACNB3P54284 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNB3P54284 AC044860.1-202ENST00000559481 777 ntBASIC19.54■□□□□ 0.72
CACNB3P54284 AC010336.2-201ENST00000564226 506 ntBASIC19.54■□□□□ 0.72
CACNB3P54284 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNB3P54284 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.54■□□□□ 0.72
CACNB3P54284 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.54■□□□□ 0.72
CACNB3P54284 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNB3P54284 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNB3P54284 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNB3P54284 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.53■□□□□ 0.72
CACNB3P54284 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNB3P54284 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.53■□□□□ 0.72
CACNB3P54284 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.53■□□□□ 0.72
CACNB3P54284 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.53■□□□□ 0.72
CACNB3P54284 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNB3P54284 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.53■□□□□ 0.72
CACNB3P54284 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CACNB3P54284 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.53■□□□□ 0.72
CACNB3P54284 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CACNB3P54284 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNB3P54284 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNB3P54284 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 AL031731.1-201ENST00000642131 2094 ntBASIC19.53■□□□□ 0.72
CACNB3P54284 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNB3P54284 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNB3P54284 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNB3P54284 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.52■□□□□ 0.72
CACNB3P54284 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.52■□□□□ 0.72
CACNB3P54284 AL589702.1-201ENST00000641229 1509 ntBASIC19.52■□□□□ 0.72
CACNB3P54284 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
CACNB3P54284 DGCR5-201ENST00000399539 862 ntBASIC19.52■□□□□ 0.72
CACNB3P54284 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNB3P54284 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.52■□□□□ 0.72
CACNB3P54284 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNB3P54284 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNB3P54284 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNB3P54284 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.52■□□□□ 0.72
CACNB3P54284 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNB3P54284 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNB3P54284 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CACNB3P54284 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CACNB3P54284 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CACNB3P54284 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNB3P54284 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNB3P54284 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 AL023806.1-201ENST00000603994 1649 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CACNB3P54284 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 SPDYE19P-201ENST00000338590 713 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CACNB3P54284 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNB3P54284 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.51■□□□□ 0.71
CACNB3P54284 KRT17P7-201ENST00000451704 1104 ntBASIC19.51■□□□□ 0.71
CACNB3P54284 RN7SL618P-201ENST00000477850 296 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms