Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.43■□□□□ 0.54
LBX1P52954 Z97180.1-201ENST00000445173 988 ntBASIC18.43■□□□□ 0.54
LBX1P52954 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.43■□□□□ 0.54
LBX1P52954 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.43■□□□□ 0.54
LBX1P52954 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.43■□□□□ 0.54
LBX1P52954 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.43■□□□□ 0.54
LBX1P52954 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.43■□□□□ 0.54
LBX1P52954 AC005357.2-202ENST00000590507 1060 ntBASIC18.43■□□□□ 0.54
LBX1P52954 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.43■□□□□ 0.54
LBX1P52954 AC005252.2-201ENST00000624630 1141 ntBASIC18.43■□□□□ 0.54
LBX1P52954 AC011491.1-203ENST00000637688 543 ntBASIC18.43■□□□□ 0.54
LBX1P52954 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.43■□□□□ 0.54
LBX1P52954 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
LBX1P52954 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.43■□□□□ 0.54
LBX1P52954 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LBX1P52954 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.43■□□□□ 0.54
LBX1P52954 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LBX1P52954 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.42■□□□□ 0.54
LBX1P52954 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LBX1P52954 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.42■□□□□ 0.54
LBX1P52954 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.42■□□□□ 0.54
LBX1P52954 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LBX1P52954 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.42■□□□□ 0.54
LBX1P52954 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LBX1P52954 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.42■□□□□ 0.54
LBX1P52954 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.42■□□□□ 0.54
LBX1P52954 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LBX1P52954 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.42■□□□□ 0.54
LBX1P52954 AC126915.1-201ENST00000522847 1038 ntBASIC18.42■□□□□ 0.54
LBX1P52954 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.42■□□□□ 0.54
LBX1P52954 AC078819.1-201ENST00000547454 765 ntBASIC18.42■□□□□ 0.54
LBX1P52954 AC012085.1-201ENST00000548270 765 ntBASIC18.42■□□□□ 0.54
LBX1P52954 AC120045.2-201ENST00000567334 178 ntBASIC18.42■□□□□ 0.54
LBX1P52954 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.42■□□□□ 0.54
LBX1P52954 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LBX1P52954 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.42■□□□□ 0.54
LBX1P52954 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.41■□□□□ 0.54
LBX1P52954 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LBX1P52954 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LBX1P52954 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.41■□□□□ 0.54
LBX1P52954 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 AL589702.1-201ENST00000641229 1509 ntBASIC18.41■□□□□ 0.54
LBX1P52954 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 FAM197Y7-201ENST00000432892 766 ntBASIC18.41■□□□□ 0.54
LBX1P52954 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.41■□□□□ 0.54
LBX1P52954 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.41■□□□□ 0.54
LBX1P52954 RPL13AP25-201ENST00000484130 612 ntBASIC18.41■□□□□ 0.54
LBX1P52954 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.41■□□□□ 0.54
LBX1P52954 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LBX1P52954 AC009084.3-201ENST00000623356 437 ntBASIC18.41■□□□□ 0.54
LBX1P52954 AC138951.2-201ENST00000623455 1161 ntBASIC18.41■□□□□ 0.54
LBX1P52954 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LBX1P52954 Z97205.2-201ENST00000564697 1639 ntBASIC18.41■□□□□ 0.54
LBX1P52954 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LBX1P52954 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.41■□□□□ 0.54
LBX1P52954 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.4■□□□□ 0.54
LBX1P52954 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LBX1P52954 AFG3L1P-217ENST00000557444 2447 ntBASIC18.4■□□□□ 0.54
LBX1P52954 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.4■□□□□ 0.54
LBX1P52954 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LBX1P52954 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.4■□□□□ 0.54
LBX1P52954 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LBX1P52954 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LBX1P52954 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.4■□□□□ 0.54
LBX1P52954 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LBX1P52954 RN7SL11P-201ENST00000471305 293 ntBASIC18.4■□□□□ 0.54
LBX1P52954 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.4■□□□□ 0.54
LBX1P52954 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.4■□□□□ 0.54
LBX1P52954 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.4■□□□□ 0.54
LBX1P52954 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.4■□□□□ 0.54
LBX1P52954 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.4■□□□□ 0.54
LBX1P52954 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.4■□□□□ 0.54
LBX1P52954 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.4■□□□□ 0.54
LBX1P52954 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.4■□□□□ 0.54
LBX1P52954 AC138649.2-201ENST00000615886 705 ntBASIC18.4■□□□□ 0.54
LBX1P52954 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LBX1P52954 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms