Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRCA2P51587 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRCA2P51587 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
BRCA2P51587 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BRCA2P51587 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
BRCA2P51587 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.28■□□□□ 0.52
BRCA2P51587 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BRCA2P51587 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.27■□□□□ 0.52
BRCA2P51587 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.27■□□□□ 0.52
BRCA2P51587 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.27■□□□□ 0.52
BRCA2P51587 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCA2P51587 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCA2P51587 AL136982.4-201ENST00000437689 1740 ntBASIC18.27■□□□□ 0.52
BRCA2P51587 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCA2P51587 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BRCA2P51587 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.27■□□□□ 0.52
BRCA2P51587 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.27■□□□□ 0.52
BRCA2P51587 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCA2P51587 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRCA2P51587 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BRCA2P51587 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.27■□□□□ 0.52
BRCA2P51587 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
BRCA2P51587 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.27■□□□□ 0.51
BRCA2P51587 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.27■□□□□ 0.51
BRCA2P51587 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
BRCA2P51587 AL162726.2-201ENST00000438986 1017 ntBASIC18.27■□□□□ 0.51
BRCA2P51587 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.27■□□□□ 0.51
BRCA2P51587 RNA5SP410-201ENST00000516285 106 ntBASIC18.27■□□□□ 0.51
BRCA2P51587 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.27■□□□□ 0.51
BRCA2P51587 SPCS2P2-201ENST00000603270 608 ntBASIC18.27■□□□□ 0.51
BRCA2P51587 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.27■□□□□ 0.51
BRCA2P51587 AL158212.4-201ENST00000624062 1286 ntBASIC18.27■□□□□ 0.51
BRCA2P51587 AC138627.1-207ENST00000641560 1006 ntBASIC18.27■□□□□ 0.51
BRCA2P51587 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.27■□□□□ 0.51
BRCA2P51587 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRCA2P51587 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BRCA2P51587 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BRCA2P51587 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.26■□□□□ 0.51
BRCA2P51587 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCA2P51587 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 FTH1P14-201ENST00000482930 551 ntBASIC18.26■□□□□ 0.51
BRCA2P51587 AC079328.1-201ENST00000560358 952 ntBASIC18.26■□□□□ 0.51
BRCA2P51587 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCA2P51587 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
BRCA2P51587 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCA2P51587 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCA2P51587 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.26■□□□□ 0.51
BRCA2P51587 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRCA2P51587 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCA2P51587 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.26■□□□□ 0.51
BRCA2P51587 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.26■□□□□ 0.51
BRCA2P51587 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BRCA2P51587 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
BRCA2P51587 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.25■□□□□ 0.51
BRCA2P51587 AC026954.1-201ENST00000429771 1293 ntBASIC18.25■□□□□ 0.51
BRCA2P51587 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.25■□□□□ 0.51
BRCA2P51587 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BRCA2P51587 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCA2P51587 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCA2P51587 MIR4492-201ENST00000581627 80 ntBASIC18.25■□□□□ 0.51
BRCA2P51587 AC026740.1-201ENST00000607068 791 ntBASIC18.25■□□□□ 0.51
BRCA2P51587 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
BRCA2P51587 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 CLK3P2-201ENST00000427566 1453 ntBASIC18.25■□□□□ 0.51
BRCA2P51587 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.25■□□□□ 0.51
BRCA2P51587 AC098859.1-201ENST00000502915 1238 ntBASIC18.25■□□□□ 0.51
BRCA2P51587 HNRNPUP1-201ENST00000554987 333 ntBASIC18.25■□□□□ 0.51
BRCA2P51587 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.25■□□□□ 0.51
BRCA2P51587 AC016629.1-201ENST00000596579 586 ntBASIC18.25■□□□□ 0.51
BRCA2P51587 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.25■□□□□ 0.51
BRCA2P51587 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRCA2P51587 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms