Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HTTP42858 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.34■□□□□ 0.53
HTTP42858 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.34■□□□□ 0.53
HTTP42858 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HTTP42858 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HTTP42858 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.34■□□□□ 0.53
HTTP42858 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.34■□□□□ 0.53
HTTP42858 YBX1P6-201ENST00000442962 1002 ntBASIC18.34■□□□□ 0.53
HTTP42858 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.34■□□□□ 0.53
HTTP42858 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 KRT90P-201ENST00000549264 1064 ntBASIC18.34■□□□□ 0.53
HTTP42858 AC010328.2-201ENST00000597698 1111 ntBASIC18.34■□□□□ 0.53
HTTP42858 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HTTP42858 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTTP42858 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.33■□□□□ 0.53
HTTP42858 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.33■□□□□ 0.53
HTTP42858 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.33■□□□□ 0.53
HTTP42858 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HTTP42858 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HTTP42858 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HTTP42858 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.33■□□□□ 0.53
HTTP42858 AC116353.5-201ENST00000638148 1699 ntBASIC18.33■□□□□ 0.53
HTTP42858 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTTP42858 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HTTP42858 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HTTP42858 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.33■□□□□ 0.53
HTTP42858 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTTP42858 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.33■□□□□ 0.53
HTTP42858 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.33■□□□□ 0.52
HTTP42858 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.33■□□□□ 0.52
HTTP42858 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.33■□□□□ 0.52
HTTP42858 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.33■□□□□ 0.52
HTTP42858 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.33■□□□□ 0.52
HTTP42858 MPRIPP1-201ENST00000452433 1089 ntBASIC18.33■□□□□ 0.52
HTTP42858 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.33■□□□□ 0.52
HTTP42858 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.33■□□□□ 0.52
HTTP42858 TDH-203ENST00000531764 1110 ntBASIC18.33■□□□□ 0.52
HTTP42858 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.33■□□□□ 0.52
HTTP42858 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.33■□□□□ 0.52
HTTP42858 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.33■□□□□ 0.52
HTTP42858 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTTP42858 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HTTP42858 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HTTP42858 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HTTP42858 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.33■□□□□ 0.52
HTTP42858 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HTTP42858 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 MIR33B-201ENST00000385104 96 ntBASIC18.32■□□□□ 0.52
HTTP42858 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 AC091804.1-201ENST00000486888 567 ntBASIC18.32■□□□□ 0.52
HTTP42858 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.32■□□□□ 0.52
HTTP42858 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.32■□□□□ 0.52
HTTP42858 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.32■□□□□ 0.52
HTTP42858 AC036164.1-201ENST00000570544 333 ntBASIC18.32■□□□□ 0.52
HTTP42858 CU634019.7-201ENST00000624153 1185 ntBASIC18.32■□□□□ 0.52
HTTP42858 FP236241.2-201ENST00000624906 1185 ntBASIC18.32■□□□□ 0.52
HTTP42858 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HTTP42858 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.32■□□□□ 0.52
HTTP42858 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.32■□□□□ 0.52
HTTP42858 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.32■□□□□ 0.52
HTTP42858 Z97205.2-201ENST00000564697 1639 ntBASIC18.32■□□□□ 0.52
HTTP42858 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.32■□□□□ 0.52
HTTP42858 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.32■□□□□ 0.52
HTTP42858 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.32■□□□□ 0.52
HTTP42858 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.32■□□□□ 0.52
HTTP42858 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.32■□□□□ 0.52
HTTP42858 AL008638.5-201ENST00000623814 1298 ntBASIC18.32■□□□□ 0.52
HTTP42858 ABALON-201ENST00000629058 1903 ntBASIC18.32■□□□□ 0.52
HTTP42858 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.32■□□□□ 0.52
HTTP42858 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.32■□□□□ 0.52
HTTP42858 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 AC091046.1-201ENST00000331871 207 ntBASIC18.32■□□□□ 0.52
HTTP42858 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.32■□□□□ 0.52
HTTP42858 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTTP42858 AP001889.1-201ENST00000525414 633 ntBASIC18.32■□□□□ 0.52
HTTP42858 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.32■□□□□ 0.52
HTTP42858 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.32■□□□□ 0.52
HTTP42858 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms