Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.91■□□□□ 0.62
COPB2P35606 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.91■□□□□ 0.62
COPB2P35606 GAPDHP21-201ENST00000450301 1010 ntBASIC18.91■□□□□ 0.62
COPB2P35606 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.91■□□□□ 0.62
COPB2P35606 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COPB2P35606 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 AC087499.5-201ENST00000452760 1342 ntBASIC18.91■□□□□ 0.62
COPB2P35606 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COPB2P35606 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.91■□□□□ 0.62
COPB2P35606 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COPB2P35606 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COPB2P35606 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
COPB2P35606 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COPB2P35606 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COPB2P35606 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.9■□□□□ 0.62
COPB2P35606 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.9■□□□□ 0.62
COPB2P35606 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.9■□□□□ 0.62
COPB2P35606 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 RNA5SP410-201ENST00000516285 106 ntBASIC18.9■□□□□ 0.62
COPB2P35606 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.9■□□□□ 0.62
COPB2P35606 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.9■□□□□ 0.62
COPB2P35606 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.9■□□□□ 0.62
COPB2P35606 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COPB2P35606 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COPB2P35606 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
COPB2P35606 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COPB2P35606 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COPB2P35606 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COPB2P35606 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.89■□□□□ 0.61
COPB2P35606 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.89■□□□□ 0.61
COPB2P35606 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COPB2P35606 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COPB2P35606 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.89■□□□□ 0.61
COPB2P35606 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COPB2P35606 AC009477.1-201ENST00000452936 217 ntBASIC18.89■□□□□ 0.61
COPB2P35606 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.89■□□□□ 0.61
COPB2P35606 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.89■□□□□ 0.61
COPB2P35606 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.89■□□□□ 0.61
COPB2P35606 RN7SL828P-201ENST00000607615 303 ntBASIC18.89■□□□□ 0.61
COPB2P35606 AL589739.1-201ENST00000607720 493 ntBASIC18.89■□□□□ 0.61
COPB2P35606 AC004233.3-201ENST00000607794 1269 ntBASIC18.89■□□□□ 0.61
COPB2P35606 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.89■□□□□ 0.61
COPB2P35606 TEX28P1-201ENST00000613479 1221 ntBASIC18.89■□□□□ 0.61
COPB2P35606 TEX28P2-201ENST00000617764 1221 ntBASIC18.89■□□□□ 0.61
COPB2P35606 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms