Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.45■□□□□ 0.38
MMP8P22894 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MMP8P22894 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.45■□□□□ 0.38
MMP8P22894 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.45■□□□□ 0.38
MMP8P22894 PDPK2P-202ENST00000562415 1191 ntBASIC17.45■□□□□ 0.38
MMP8P22894 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.45■□□□□ 0.38
MMP8P22894 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 FAM197Y3-203ENST00000618346 717 ntBASIC17.45■□□□□ 0.38
MMP8P22894 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
MMP8P22894 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MMP8P22894 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
MMP8P22894 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 AC006449.6-201ENST00000612330 2296 ntBASIC17.45■□□□□ 0.38
MMP8P22894 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.45■□□□□ 0.38
MMP8P22894 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
MMP8P22894 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MMP8P22894 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP8P22894 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.44■□□□□ 0.38
MMP8P22894 AL596087.1-201ENST00000400979 1969 ntBASIC17.44■□□□□ 0.38
MMP8P22894 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.44■□□□□ 0.38
MMP8P22894 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 REXO1L8P-201ENST00000604378 1897 ntBASIC17.44■□□□□ 0.38
MMP8P22894 AC092919.2-201ENST00000623631 1645 ntBASIC17.44■□□□□ 0.38
MMP8P22894 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.44■□□□□ 0.38
MMP8P22894 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.44■□□□□ 0.38
MMP8P22894 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MMP8P22894 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.44■□□□□ 0.38
MMP8P22894 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 MED15P5-201ENST00000423150 992 ntBASIC17.44■□□□□ 0.38
MMP8P22894 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 KRT18P3-201ENST00000451602 1288 ntBASIC17.44■□□□□ 0.38
MMP8P22894 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 RNA5SP416-201ENST00000516838 111 ntBASIC17.44■□□□□ 0.38
MMP8P22894 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.44■□□□□ 0.38
MMP8P22894 AL513190.1-201ENST00000621254 727 ntBASIC17.44■□□□□ 0.38
MMP8P22894 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MMP8P22894 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP8P22894 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP8P22894 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
MMP8P22894 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MMP8P22894 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MMP8P22894 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MMP8P22894 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MMP8P22894 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.43■□□□□ 0.38
MMP8P22894 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MMP8P22894 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP8P22894 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP8P22894 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP8P22894 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.43■□□□□ 0.38
MMP8P22894 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP8P22894 AC092865.6-201ENST00000642101 219 ntBASIC17.43■□□□□ 0.38
MMP8P22894 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP8P22894 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MMP8P22894 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
MMP8P22894 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.43■□□□□ 0.38
MMP8P22894 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP8P22894 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms