Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL1P22362 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL1P22362 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCL1P22362 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL1P22362 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CCL1P22362 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL1P22362 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL1P22362 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL1P22362 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 CDC14C-201ENST00000428251 1719 ntBASIC14.28□□□□□ -0.12
CCL1P22362 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL1P22362 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL1P22362 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL1P22362 EMBP1-201ENST00000458200 901 ntBASIC14.28□□□□□ -0.12
CCL1P22362 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL1P22362 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL1P22362 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL1P22362 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL1P22362 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL1P22362 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CCL1P22362 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCL1P22362 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL1P22362 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
CCL1P22362 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL1P22362 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL1P22362 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL1P22362 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCL1P22362 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCL1P22362 AC069224.1-201ENST00000566372 1715 ntBASIC14.27□□□□□ -0.12
CCL1P22362 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCL1P22362 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CCL1P22362 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL1P22362 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL1P22362 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL1P22362 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCL1P22362 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL1P22362 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL1P22362 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL1P22362 HMGA1P7-201ENST00000406908 502 ntBASIC14.27□□□□□ -0.13
CCL1P22362 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCL1P22362 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCL1P22362 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL1P22362 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CCL1P22362 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCL1P22362 CXCL1P1-201ENST00000502804 216 ntBASIC14.27□□□□□ -0.13
CCL1P22362 KRT18P56-201ENST00000507275 550 ntBASIC14.27□□□□□ -0.13
CCL1P22362 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CCL1P22362 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.27□□□□□ -0.13
CCL1P22362 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL1P22362 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CCL1P22362 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 AL031055.1-201ENST00000606362 631 ntBASIC14.27□□□□□ -0.13
CCL1P22362 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCL1P22362 AC117500.6-201ENST00000624871 588 ntBASIC14.27□□□□□ -0.13
CCL1P22362 FAM215A-202ENST00000632077 792 ntBASIC14.27□□□□□ -0.13
CCL1P22362 AL645728.2-201ENST00000641974 660 ntBASIC14.27□□□□□ -0.13
CCL1P22362 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCL1P22362 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 AC112504.1-201ENST00000623415 1841 ntBASIC14.27□□□□□ -0.13
CCL1P22362 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CCL1P22362 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL1P22362 AC005622.1-201ENST00000636801 1703 ntBASIC14.27□□□□□ -0.13
CCL1P22362 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCL1P22362 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCL1P22362 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.26□□□□□ -0.13
CCL1P22362 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCL1P22362 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms