Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.31■□□□□ 0.04
THBS1P07996 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.31■□□□□ 0.04
THBS1P07996 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 AC022188.1-201ENST00000620960 1664 ntBASIC15.31■□□□□ 0.04
THBS1P07996 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
THBS1P07996 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.31■□□□□ 0.04
THBS1P07996 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 AC079328.2-201ENST00000561241 3354 ntBASIC15.3■□□□□ 0.04
THBS1P07996 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.3■□□□□ 0.04
THBS1P07996 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.3■□□□□ 0.04
THBS1P07996 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 AC108751.1-201ENST00000490852 363 ntBASIC15.3■□□□□ 0.04
THBS1P07996 CXCL1P1-201ENST00000502804 216 ntBASIC15.3■□□□□ 0.04
THBS1P07996 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.3■□□□□ 0.04
THBS1P07996 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
THBS1P07996 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.3■□□□□ 0.04
THBS1P07996 MIR3909-201ENST00000579518 119 ntBASIC15.3■□□□□ 0.04
THBS1P07996 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 AC006449.6-201ENST00000612330 2296 ntBASIC15.3■□□□□ 0.04
THBS1P07996 MIR7706-201ENST00000613747 67 ntBASIC15.3■□□□□ 0.04
THBS1P07996 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.3■□□□□ 0.04
THBS1P07996 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
THBS1P07996 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS1P07996 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
THBS1P07996 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.29■□□□□ 0.04
THBS1P07996 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
THBS1P07996 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
THBS1P07996 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
THBS1P07996 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.29■□□□□ 0.04
THBS1P07996 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.29■□□□□ 0.04
THBS1P07996 AC092910.1-201ENST00000482027 1129 ntBASIC15.29■□□□□ 0.04
THBS1P07996 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.29■□□□□ 0.04
THBS1P07996 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.29■□□□□ 0.04
THBS1P07996 AC021097.1-201ENST00000607902 574 ntBASIC15.29■□□□□ 0.04
THBS1P07996 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.29■□□□□ 0.04
THBS1P07996 AL645728.2-201ENST00000641974 660 ntBASIC15.29■□□□□ 0.04
THBS1P07996 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 AL596087.1-201ENST00000400979 1969 ntBASIC15.29■□□□□ 0.04
THBS1P07996 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
THBS1P07996 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THBS1P07996 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.28■□□□□ 0.04
THBS1P07996 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THBS1P07996 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms