Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC28A2O43868 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC28A2O43868 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC28A2O43868 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC28A2O43868 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A2O43868 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A2O43868 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 ELK2BP-201ENST00000415014 1224 ntBASIC16.06■□□□□ 0.16
SLC28A2O43868 AC002472.2-201ENST00000442739 958 ntBASIC16.06■□□□□ 0.16
SLC28A2O43868 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC28A2O43868 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC28A2O43868 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A2O43868 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC28A2O43868 AL390955.2-201ENST00000603032 514 ntBASIC16.06■□□□□ 0.16
SLC28A2O43868 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A2O43868 AC004790.2-201ENST00000623588 572 ntBASIC16.06■□□□□ 0.16
SLC28A2O43868 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC28A2O43868 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC28A2O43868 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC28A2O43868 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC28A2O43868 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC28A2O43868 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLC28A2O43868 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.05■□□□□ 0.16
SLC28A2O43868 BASP1P1-201ENST00000430708 665 ntBASIC16.05■□□□□ 0.16
SLC28A2O43868 SIGLEC30P-201ENST00000455569 941 ntBASIC16.05■□□□□ 0.16
SLC28A2O43868 AC022494.1-201ENST00000466044 728 ntBASIC16.05■□□□□ 0.16
SLC28A2O43868 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
SLC28A2O43868 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
SLC28A2O43868 DUX4L27-201ENST00000554796 1261 ntBASIC16.05■□□□□ 0.16
SLC28A2O43868 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SLC28A2O43868 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.05■□□□□ 0.16
SLC28A2O43868 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC28A2O43868 AL589182.2-201ENST00000619332 1049 ntBASIC16.05■□□□□ 0.16
SLC28A2O43868 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC28A2O43868 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC28A2O43868 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms