Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 AC021097.1-201ENST00000607902 574 ntBASIC14.81□□□□□ -0.04
TRAF3IP2O43734 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAF3IP2O43734 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 AL022342.1-201ENST00000400363 863 ntBASIC14.8□□□□□ -0.04
TRAF3IP2O43734 PMS2P4-201ENST00000412466 1052 ntBASIC14.8□□□□□ -0.04
TRAF3IP2O43734 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 AC109635.5-201ENST00000533593 962 ntBASIC14.8□□□□□ -0.04
TRAF3IP2O43734 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 PDPK2P-202ENST00000562415 1191 ntBASIC14.8□□□□□ -0.04
TRAF3IP2O43734 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 AL513190.1-201ENST00000621254 727 ntBASIC14.8□□□□□ -0.04
TRAF3IP2O43734 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 PCGF3-213ENST00000620529 1899 ntBASIC14.8□□□□□ -0.04
TRAF3IP2O43734 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAF3IP2O43734 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 AC079328.2-201ENST00000561241 3354 ntBASIC14.79□□□□□ -0.04
TRAF3IP2O43734 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 AC140658.5-201ENST00000438532 169 ntBASIC14.79□□□□□ -0.04
TRAF3IP2O43734 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 AL009183.1-201ENST00000603760 355 ntBASIC14.79□□□□□ -0.04
TRAF3IP2O43734 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAF3IP2O43734 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms