Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.12■□□□□ 0.33
KCNN4O15554 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 MRPL20P1-201ENST00000400819 433 ntBASIC17.12■□□□□ 0.33
KCNN4O15554 AC108073.2-201ENST00000464002 357 ntBASIC17.12■□□□□ 0.33
KCNN4O15554 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KCNN4O15554 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNN4O15554 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNN4O15554 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.12■□□□□ 0.33
KCNN4O15554 FAM215A-202ENST00000632077 792 ntBASIC17.12■□□□□ 0.33
KCNN4O15554 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KCNN4O15554 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
KCNN4O15554 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNN4O15554 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNN4O15554 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNN4O15554 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KCNN4O15554 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 MTHFR-217ENST00000641820 1569 ntBASIC17.11■□□□□ 0.33
KCNN4O15554 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 AC004870.1-201ENST00000315132 882 ntBASIC17.11■□□□□ 0.33
KCNN4O15554 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 HCG4-201ENST00000418983 998 ntBASIC17.11■□□□□ 0.33
KCNN4O15554 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
KCNN4O15554 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.11■□□□□ 0.33
KCNN4O15554 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 AL031008.1-201ENST00000619963 541 ntBASIC17.11■□□□□ 0.33
KCNN4O15554 AC004790.2-201ENST00000623588 572 ntBASIC17.11■□□□□ 0.33
KCNN4O15554 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KCNN4O15554 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNN4O15554 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KCNN4O15554 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNN4O15554 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNN4O15554 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
KCNN4O15554 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNN4O15554 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
KCNN4O15554 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNN4O15554 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
KCNN4O15554 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.1■□□□□ 0.33
KCNN4O15554 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
KCNN4O15554 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KCNN4O15554 GPAA1P2-202ENST00000606848 1787 ntBASIC17.1■□□□□ 0.33
KCNN4O15554 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNN4O15554 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNN4O15554 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KCNN4O15554 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms