Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 AC092865.6-201ENST00000642101 219 ntBASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SMIM9A6NGZ8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC105020.1-201ENST00000435356 2205 ntBASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC006538.1-201ENST00000567905 1585 ntBASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 UPF3AP3-201ENST00000420996 769 ntBASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC092865.5-201ENST00000545435 363 ntBASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AP002472.1-201ENST00000577490 586 ntBASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC020765.3-201ENST00000613051 740 ntBASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AKAP8P1-201ENST00000434743 1349 ntBASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM9A6NGZ8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 KRT18P13-201ENST00000400056 1290 ntBASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM9A6NGZ8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms