Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC131009.4-201ENST00000624048 1740 ntBASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLIP2Q9UDT6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 DOC2GP-204ENST00000639052 2548 ntBASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 TIMM8BP1-201ENST00000452384 211 ntBASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 KRT8P48-201ENST00000515599 1220 ntBASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 AC087641.1-201ENST00000557561 1021 ntBASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 AL009183.1-201ENST00000603760 355 ntBASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 AC004835.2-201ENST00000603762 682 ntBASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 AC026120.1-201ENST00000611536 926 ntBASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
CLIP2Q9UDT6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 AC027796.2-201ENST00000575326 344 ntBASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 FLJ38576-201ENST00000623820 2459 ntBASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 AC092068.3-201ENST00000587894 2016 ntBASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CLIP2Q9UDT6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 AC092474.2-201ENST00000424288 719 ntBASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 FAM86C2P-203ENST00000528684 1004 ntBASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 AC124947.2-201ENST00000547118 1133 ntBASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.7■□□□□ 0.74
CLIP2Q9UDT6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms