Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 OR8S1-201ENST00000310194 1080 ntBASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 AC139713.2-201ENST00000641328 2723 ntBASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HCFC1R1Q9NWW0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 SPDYE18-201ENST00000510091 1050 ntBASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 AC010336.2-201ENST00000564226 506 ntBASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.13■□□□□ 0.33
HCFC1R1Q9NWW0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 AL589702.1-201ENST00000641229 1509 ntBASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 AC007274.1-201ENST00000439805 662 ntBASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 AC044860.1-202ENST00000559481 777 ntBASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC1R1Q9NWW0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms