Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 TSSK5P-201ENST00000423978 907 ntBASIC19.91■□□□□ 0.78
SALL1Q9NSC2 AC004890.2-204ENST00000481968 304 ntBASIC19.91■□□□□ 0.78
SALL1Q9NSC2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 SPDYE12P-201ENST00000618416 771 ntBASIC19.91■□□□□ 0.78
SALL1Q9NSC2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 AL035456.1-201ENST00000456064 1369 ntBASIC19.91■□□□□ 0.78
SALL1Q9NSC2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AL031731.1-201ENST00000642131 2094 ntBASIC19.9■□□□□ 0.78
SALL1Q9NSC2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 GPAA1P2-202ENST00000606848 1787 ntBASIC19.9■□□□□ 0.78
SALL1Q9NSC2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AC241585.1-201ENST00000433527 519 ntBASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 HLA-V-204ENST00000476601 1289 ntBASIC19.9■□□□□ 0.78
SALL1Q9NSC2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 BANF1P1-201ENST00000553684 263 ntBASIC19.9■□□□□ 0.78
SALL1Q9NSC2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AC003101.2-201ENST00000612557 442 ntBASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL1Q9NSC2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
SALL1Q9NSC2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SALL1Q9NSC2 AL118508.1-201ENST00000613502 2345 ntBASIC19.89■□□□□ 0.78
SALL1Q9NSC2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SALL1Q9NSC2 GGT4P-201ENST00000623672 1708 ntBASIC19.89■□□□□ 0.78
SALL1Q9NSC2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SALL1Q9NSC2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 FAM207CP-201ENST00000443486 507 ntBASIC19.89■□□□□ 0.77
SALL1Q9NSC2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 AC138761.1-201ENST00000584393 385 ntBASIC19.89■□□□□ 0.77
SALL1Q9NSC2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 AC100757.3-201ENST00000622361 1406 ntBASIC19.89■□□□□ 0.77
SALL1Q9NSC2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL1Q9NSC2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms