Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
NOTCH4Q99466 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NOTCH4Q99466 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH4Q99466 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NOTCH4Q99466 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NOTCH4Q99466 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.9■□□□□ 0.3
NOTCH4Q99466 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NOTCH4Q99466 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NOTCH4Q99466 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
NOTCH4Q99466 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 AZGP1P1-201ENST00000411909 902 ntBASIC16.89■□□□□ 0.29
NOTCH4Q99466 ELK1P1-201ENST00000485699 580 ntBASIC16.89■□□□□ 0.29
NOTCH4Q99466 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 GGT3P-204ENST00000453783 1664 ntBASIC16.89■□□□□ 0.29
NOTCH4Q99466 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH4Q99466 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 USP32P1-208ENST00000506594 1164 ntBASIC16.89■□□□□ 0.29
NOTCH4Q99466 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 AC106886.1-201ENST00000568660 600 ntBASIC16.89■□□□□ 0.29
NOTCH4Q99466 MIR4321-201ENST00000592276 80 ntBASIC16.89■□□□□ 0.29
NOTCH4Q99466 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
NOTCH4Q99466 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 AC005915.1-201ENST00000624912 2018 ntBASIC16.88■□□□□ 0.29
NOTCH4Q99466 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 HIST3H2BA-201ENST00000436555 524 ntBASIC16.88■□□□□ 0.29
NOTCH4Q99466 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 AL365330.1-201ENST00000607459 531 ntBASIC16.88■□□□□ 0.29
NOTCH4Q99466 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH4Q99466 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NOTCH4Q99466 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AC007389.4-201ENST00000454674 793 ntBASIC16.87■□□□□ 0.29
NOTCH4Q99466 SERBP1P3-201ENST00000459980 809 ntBASIC16.87■□□□□ 0.29
NOTCH4Q99466 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 LINC01115-203ENST00000606068 577 ntBASIC16.87■□□□□ 0.29
NOTCH4Q99466 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH4Q99466 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.87■□□□□ 0.29
NOTCH4Q99466 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms