Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.81□□□□□ -0.2
GAFA1Q96PS6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
GAFA1Q96PS6 WASH6P-202ENST00000359512 1437 ntBASIC13.81□□□□□ -0.2
GAFA1Q96PS6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 AL355306.1-201ENST00000415580 579 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 HTR5BP-201ENST00000430851 1154 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 MKNK2P1-201ENST00000437526 628 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 KRT18P34-201ENST00000488218 1270 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 RARRES2P8-201ENST00000566335 367 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GAFA1Q96PS6 ME2P1-201ENST00000426028 1970 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 AC005052.1-201ENST00000625181 2492 ntBASIC13.8□□□□□ -0.2
GAFA1Q96PS6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 LINC01144-201ENST00000626198 1710 ntBASIC13.79□□□□□ -0.2
GAFA1Q96PS6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AL118508.1-201ENST00000613502 2345 ntBASIC13.79□□□□□ -0.2
GAFA1Q96PS6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AC092865.5-201ENST00000545435 363 ntBASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AC010327.4-202ENST00000591484 748 ntBASIC13.79□□□□□ -0.2
GAFA1Q96PS6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
GAFA1Q96PS6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms