Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM47Q96LD4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 AC009118.2-201ENST00000613275 655 ntBASIC19.43■□□□□ 0.7
TRIM47Q96LD4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM47Q96LD4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 AP000842.3-202ENST00000569238 1080 ntBASIC19.42■□□□□ 0.7
TRIM47Q96LD4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM47Q96LD4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 ARSEP1-201ENST00000420443 635 ntBASIC19.41■□□□□ 0.7
TRIM47Q96LD4 TSSK5P-201ENST00000423978 907 ntBASIC19.41■□□□□ 0.7
TRIM47Q96LD4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 AC109635.5-201ENST00000533593 962 ntBASIC19.41■□□□□ 0.7
TRIM47Q96LD4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 AC100757.3-201ENST00000622361 1406 ntBASIC19.41■□□□□ 0.7
TRIM47Q96LD4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM47Q96LD4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms