Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL031055.1-201ENST00000606362 631 ntBASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 AD000864.1-201ENST00000624076 2295 ntBASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM48Q8IWZ4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 AL671277.1-201ENST00000429656 993 ntBASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 AP000344.2-201ENST00000512987 629 ntBASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 AC092068.3-201ENST00000587894 2016 ntBASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM48Q8IWZ4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 AL121761.2-201ENST00000598007 1648 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 AL355306.1-201ENST00000415580 579 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 SPDYE11-202ENST00000450699 704 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 SPDYE9P-201ENST00000570642 692 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 CYP2A7P1-201ENST00000595391 815 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 AL009183.1-201ENST00000603760 355 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 AC004835.2-201ENST00000603762 682 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 SPDYE10P-202ENST00000612005 668 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 SPDYE8P-202ENST00000612377 668 ntBASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms